BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB017D10SP1|AL427161
(953 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1582 1868 0.0
>3x_Contig1582
Length = 14087
Score = 1868 bits (941), Expect = 0.0
Identities = 950/953 (99%), Gaps = 1/953 (0%)
Strand = Plus / Minus
Query: 2 atcttgaaatcgataccgattgtggtgatgaaagttggtgtgaacttatcttcaacaaaa 61
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3827 atcttgaaatcgataccgattgtggtgatgaaagttggtgtgaacttatcttcaacaaaa 3768
Query: 62 cgaaccaaaagacatgatttacctacaccggaatcacctagaagtaaaatcttcatgaca 121
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3767 cgaaccaaaagacatgatttacctacaccggaatcacctagaagtaaaatcttcatgaca 3708
Query: 122 gaatcatagtttttattcgtgctgccgttagcagaaaccgttcttaatccagacattata 181
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3707 gaatcatagtttttattcgtgctgccgttagcagaaaccgttcttaatccagacattata 3648
Query: 182 gtttcaatctcccttgtttccttcacgcttcaattaagtgaaaaaaattgatatcacagt 241
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3647 gtttcaatctcccttgtttccttcacgcttcaattaagtgaaaaaaattgatatcacagt 3588
Query: 242 tcaacactgttattttatctcgatatattggaggagtggcgagctggttatatctggtca 301
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3587 tcaacactgttattttatctcgatatattggaggagtggcgagctggttatatctggtca 3528
Query: 302 acagaatctgggttttaatagctcggccgtaaagtgtttgggttagtgcctttcgtgatg 361
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3527 acagaatctgggttttaatagctcggccgtaaagtgtttgggttagtgcctttcgtgatg 3468
Query: 362 gctatcctgctttcaccctttcaaacaatatttgtccaaaatctagatactgatcgaatt 421
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3467 gctatcctgctttcaccctttcaaacaatatttgtccaaaatctagatactgatcgaatt 3408
Query: 422 cgtatatggtgataggcatacccaatgtcaagttaaattatacgatttatacttgtagat 481
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3407 cgtatatggtgataggcatacccaatgtcaagttaaattatacgatttatacttgtagat 3348
Query: 482 gtacatatatattcatgtgcatacgcagcttgtgggtcatctgtgtcgattgtgcaactt 541
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3347 gtacatatatattcatgtgcatacgcagcttgtgggtcatctgtgtcgattgtgcaactt 3288
Query: 542 ctcaggcgtagtaactcctccaaagaacaccttccatatcttctaattgctccgaggtga 601
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3287 ctcaggcgtagtaactcctccaaagaacaccttccatatcttctaattgctccgaggtga 3228
Query: 602 actggtatctgtccaaatgccaggtatctgctctaactttcttgtatctagagatgatgt 661
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3227 actggtatctgtccaaatgccaggtatctgctctaactttcttgtatctagagatgatgt 3168
Query: 662 tctttgcatcagcaccgcacataccgcttgttcttgcccaggacgctagtagtgccatat 721
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3167 tctttgcatcagcaccgcacataccgcttgttcttgcccaggacgctagtagtgccatat 3108
Query: 722 tctctggaatccaatttggtaacggtg-aacgtacgggaatgcttcgatgatggcaccga 780
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 3107 tctctggaatccaatttggtaacggtgaaacgtacgggaatgcttcgatgatggcaccga 3048
Query: 781 gacccaagatcgcaccgtgaatatctgtgttggatttggagagtgcagctttctcctcga 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3047 gacccaagatcgcaccgtgaatatctgtgttggatttggagagtgcagctttctcctcga 2988
Query: 841 aagtatatgaaccaagttgacgcttgaagttttccaagagagtgtgcmaagtatcggtat 900
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 2987 aagtatatgaaccaagttgacgcttgaagttttccaagagagtgtgcaaagtatcggtat 2928
Query: 901 cataagakatgttatgcacgataccggcaaggacataggaagccttgagacga 953
||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2927 cataagatatgttatgcacgataccggcaaggacataggaagccttgagacga 2875
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6591
Number of Sequences: 1807
Number of extensions: 6591
Number of successful extensions: 44
Number of sequences better than 1.0e-20: 1
length of query: 953
length of database: 10,358,551
effective HSP length: 16
effective length of query: 937
effective length of database: 10,329,639
effective search space: 9678871743
effective search space used: 9678871743
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.7 bits)